SubtiBank SubtiBank
yngK [2019-07-02 10:43:44]
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yngK [2019-07-02 10:43:44]

unknown
locus
BSU18280
pI
8.35
mw
58.70 kDa
protein length
510 aa Sequence Blast
gene length
1533 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
yotA
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]

    • Gene

    Coordinates
    1,958,027 1,959,559

    The protein

    Structure

  • [PDB|5OQ3] (from Clostridium difficile, 53% identity) [pubmed|29083543]

    • Expression and Regulation

    Operons

    genes
    [gene|69CCCC3266A857A652BCCB505A5C9FAB795C7A5F|yngK]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-B084 (yngK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1083 NBRP B. subtilis, Japan]
  • BKE18280 ([gene|69CCCC3266A857A652BCCB505A5C9FAB795C7A5F|yngK]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18280 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTGTTTCTTCTCCCCC, downstream forward: _UP4_TAAGAAATGAGAAGGACGGC
  • BKK18280 ([gene|69CCCC3266A857A652BCCB505A5C9FAB795C7A5F|yngK]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18280 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTGTTTCTTCTCCCCC, downstream forward: _UP4_TAAGAAATGAGAAGGACGGC

    • References

    Research papers

  • 29083543